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CIRDNA

NAME

cirdna − Draws circular maps of DNA constructs

SYNOPSIS

cirdna −infile infile [−maxgroups integer] [−maxlabels integer] −ruler boolean −blocktype list [−originangle float] −posticks selection −posblocks selection [−intersymbol boolean] [−intercolour integer] [−interticks boolean] [−gapsize integer] [−ticklines boolean] [−textheight float] [−textlength float] [−tickheight float] [−blockheight float] [−rangeheight float] [−gapgroup float] [−postext float] −graphout graph

cirdna −help

DESCRIPTION

cirdna is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Display" command group(s).

OPTIONS

Input section
−infile
infile

Default value: inputfile

Additional section
−maxgroups
integer

Default value: 20

−maxlabels integer

Default value: 10000

Output section
−ruler
boolean

Default value: Y

−blocktype list

Default value: Filled

−originangle float

Default value: 90

−posticks selection

Default value: Out

−posblocks selection

Default value: In

−intersymbol boolean

Default value: Y

−intercolour integer

Default value: 1

−interticks boolean

Default value: N

−gapsize integer

Default value: 500

−ticklines boolean

Default value: N

−textheight float

Height of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0

−textlength float

Length of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0

−tickheight float

Height of ticks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0

−blockheight float

Height of blocks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0

−rangeheight float

Height of range ends. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0

−gapgroup float

Space between groups. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0

−postext float

Space between text and ticks, blocks, and ranges. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0

−graphout graph

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

cirdna is fully documented via the tfm(1) system.

AUTHOR

Debian−Med Packaging Team <debian−med−packaging@lists.alioth.debian.org>

Wrote the script used to autogenerate this manual page.

COPYRIGHT

Copyright © 2007 Debian-Med Packaging Team

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.

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