Last Change: 2018-09-07, 16:50
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newcpgreport − Report CpG rich areas
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newcpgreport −sequence seqall −window integer −shift integer −minlen integer −minoe float −minpc float −outfile outfile |
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newcpgreport −help |
newcpgreport is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:CpG Islands" command group(s).
Input section
−sequence seqall
Required section
−window integer
Default value: 100
−shift integer
Default value: 1
−minlen integer
Default value: 200
−minoe float
Default value: 0.6
−minpc float
Default value: 50.
Output section
−outfile outfile
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
newcpgreport is fully documented via the tfm(1) system.
Debian−Med Packaging Team <debian−med−packaging@lists.alioth.debian.org>
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Wrote the script used to autogenerate this manual page. |
Copyright © 2007 Debian-Med Packaging Team
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.