nps2gps − convert nucleotide-protein sets to ASN.1 genomic product sets
nps2gps [−] [−F] [−L] [−P] [−R] [−f str] [−i filename] [−o filename] [−p path] [−r path] [−x str]
nps2gps converts NCBI Bioseq-sets from simple nucleotide-protein sets to full genomic product sets complete with mRNA transcripts, which it outputs as text ASN.1.
A summary of options is included below.
− |
Print usage message |
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−F |
Map by Feature ID |
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−L |
Lock components in advance |
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−P |
mRNA ID from Protein |
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−R |
Enable Remote fetching from ID |
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−f str |
Substring filter |
−i filename
Single input file (default = stdin)
−o filename
Single output file (default = stdout)
−p path
Path to files for batch conversion
−r path
Path for results of batch conversion
−x str |
File selection suffix for batch conversion (default = .ent) |
The National Center for Biotechnology Information.