tabdelim_to_db - convert tab-delimited data into fsdb
tabdelim_to_db <source.tabdelim >target.fsdb
Converts a tab-delimited data stream to Fsdb format.
The input is tab-delimited (not fsdb): the first row is taken to be the names of the columns; tabs separate columns.
The output is a fsdb file with a proper header and a tab field-separator.
This module also supports the standard fsdb options:
-d |
Enable debugging output. |
-i or --input InputSource
Read from InputSource, typically a file name, or "-" for standard input, or (if in Perl) a IO::Handle, Fsdb::IO or Fsdb::BoundedQueue objects.
-o or --output OutputDestination
Write to OutputDestination, typically a file name, or "-" for standard output, or (if in Perl) a IO::Handle, Fsdb::IO or Fsdb::BoundedQueue objects.
--autorun or --noautorun
By default, programs process automatically, but Fsdb::Filter objects in Perl do not run until you invoke the run() method. The "--(no)autorun" option controls that behavior within Perl.
--help
Show help.
--man
Show full manual.
Input:
name email test1
Tommy Trojan tt AT usc DOT edu 80
Joe Bruin joeb AT ucla DOT edu 85
J. Random jr AT caltech DOT edu 90
Command:
tabdelim_to_db
Output:
#fsdb -Ft name email test1
Tommy Trojan tt AT usc DOT edu 80
Joe Bruin joeb AT ucla DOT edu 85
J. Random jr AT caltech DOT edu 90
# | dbcoldefine name email test1
Fsdb.
new
$filter = new Fsdb::Filter::tabdelim_to_db(@arguments);
Create a new tabdelim_to_db object, taking command-line arguments.
set_defaults
$filter->set_defaults();
Internal: set up defaults.
parse_options
$filter->parse_options(@ARGV);
Internal: parse command-line arguments.
setup
$filter->setup();
Internal: setup, parse headers.
run
$filter->run();
Internal: run over each rows.
Copyright (C) 1991-2008 by John Heidemann <johnh AT isi DOT edu>
This program is distributed under terms of the GNU general public license, version 2. See the file COPYING with the distribution for details.