INSDSEQGET

NAME

insdseqget − format sequences from GenBank as an XML INSDSet

SYNOPSIS

insdseqget [−] [−d filename] [−i filename] [−m n/p/b] [−n] [−o filename] [−v]

DESCRIPTION

insdseqget retrieves biological sequence data from GenBank (according to an input list of GI accession numbers) and prints it out as an XML INSDSet document.

OPTIONS

A summary of options is included below.

−

Print usage message

−d filename

Input file name for date list (desired accessions, one per line, followed by a blank line and a list of allowed dates, also one per line)

−i filename

Input file name for GI list (default = stdin)

−m n/p/b

Molecule type:

	n		Nucleotide (default)
	p		Protein
	b		Both
	−n

Return only new records (for which the given GI refers to an old version)

−o filename

Output file name for the XML INSDSet (default = stdout)

−v

Fetch SNP Variations

AUTHOR

The National Center for Biotechnology Information.