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HONEY

NAME

Honey − genomic structural variation discovery

SYNOPSIS

Honey {subcommand}[options]

DESCRIPTION

PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants.

OPTIONS

For a complete description, see the help menu
−h, −−help

Show summary of options.

SEE ALSO

blasr(1)
/usr/share/doc/pbhoney/HoneyReadme.txt

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