kmc_tools−dump − dump k−mers and counters to text file
kmc_tools dump [dump_params] <inputdb> [input_params] <output>
This command produces a text dump of the KMC database.
For each input there are additional parameters:
−ci<value>
exclude k−mers occurring less than <value> times
−cx<value>
exclude k−mers occurring more of than <value> times
Dump operation parameters:
−s
sorted output
kmc_tools dump wy_kmc2 −ci3 −cx1000 dump.txt
KMC was originally written by:
• Sebastian Deorowicz (sebastian DOT deorowicz AT polsl DOT pl 〈URL: mailto:sebastian.deorowicz@polsl.pl 〉)
• Marek Kokot
• Szymon Grabowski
• Agnieszka Debudaj−Grabysz
KMC is a free software distributed under GNU GPL3 licence for academic, research, and commercial use.