alignment−info

NAME

alignment−info − Show useful statistics about the alignment.

SYNOPSIS

alignment−info alignment−file [tree−file] [OPTIONS]

DESCRIPTION

Show useful statistics about the alignment.

ALLOWED OPTIONS:

−−align arg

file with sequences and initial alignment

−−tree arg

file with initial tree

−−alphabet arg

specify the alphabet: DNA, RNA, Amino−Acids, Triplets, or Codons

REPORTING BUGS:

BAli−Phy online help: <http://www.bali-phy.org/docs.php>.

Please send bug reports to <bali-phy-users AT googlegroups DOT com>.

AUTHORS

Benjamin Redelings.